Your AI Bioinformatician.

Run full omics pipelines from a single prompt.

Apple Silicon macOS and Debian / Ubuntu x86_64 · AI usage billed separately

OmicsAgent
→Trim low-quality FASTQ tails and keep reads of at least 30 bases

✓ Read the four-sequence sample FASTQ on this computer

✓ Trimmed low-quality tails at Q20

✓ Saved 2 reads and 72 bases to filtered.fastq

✓ Local preprocessing complete · $0 compute

OmicsAgent

Run full pipelines from a single prompt

Local analysis for genomics, transcriptomics, proteomics, epigenomics, and more. Azure Batch remains available for enterprise cloud workloads. Stop managing infrastructure and start doing science.

  • Launch complex pipelines with natural language
  • Local execution on macOS and Linux
  • Pre-configured best-practice workflows
  • Real-time monitoring dashboards
  • Files and results saved on your computer
Download Desktop
OmicsAgent workflow runner

OmicsAgent Performance

See how models perform on end-to-end bioinformatics pipelines, from raw data to final results.

Read the BioAgent Bench blog post->

All Tasks Per Model

Open environment with reference data

Completion rates for end-to-end bioinformatics pipelines in the with-reference benchmark.

Updated Jan 13, 2026, 11:32 AM

Tasks 10
Focused model: GPT 5.293%Tasks 10Steps 39/42
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